PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21084

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 518aa MW: 56252 Da PI: 9.6263

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21084	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H OIW21084 66 FICEICNKGFQRDQNLQLHRRGH 88 89*******************88 PP
2	zf-C2H2	11.4	0.001	142	164	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C k + +s+ k H +t+ OIW21084 142 WKCEKCAKKYAVQSDWKAHTKTC 164 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MMQGYPFSLS TSSSIGGFSQ EQNTNPNPKP NQPPLPKKKR NLPGTPDPDA EVIALSPKTL 60 MATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLRQRSNK EVRKKVYICP EKTCVHHDPS 120 RALGDLTGIK KHFSRKHGEK KWKCEKCAKK YAVQSDWKAH TKTCGTREYK CDCGTLFSRK 180 DSFITHRAFC DALAEESARL TSVTTSTNLN FKNEESSMMH SQQGLAHGLI GGDGSLHQNV 240 AGIPQFVPHD FQLHFNGIGM GEDQQRPSLS LWLNQGNHHQ MNNTNNNNNN PSDMGQNSGL 300 YVSSGLPEIM QMAHANNNAL IGSNSPMMSN YGVPVTNSTT ANLSLSSLPI GKRVESSGNS 360 DLASIYSDGQ NKQSSKPASP MSATALLQKA AQMGSIRSNT NPSIFNGSFG VMTSSSSQQE 420 NFASTSSAVA MLGNAANFSS LSHSSNSFDQ LMMQTNQSES MKLKILSGSN SAEHNLTRDF 480 LGVSGGGGGA GPQFLPQELA KFASLGSPMG LTQFTGNQ

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MMQGYPFSLS TSSSIGGFSQ EQNTNPNPKP NQPPLPKKKR NLPGTPDPDA EVIALSPKTL  60
MATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLRQRSNK EVRKKVYICP EKTCVHHDPS  120
RALGDLTGIK KHFSRKHGEK KWKCEKCAKK YAVQSDWKAH TKTCGTREYK CDCGTLFSRK  180
DSFITHRAFC DALAEESARL TSVTTSTNLN FKNEESSMMH SQQGLAHGLI GGDGSLHQNV  240
AGIPQFVPHD FQLHFNGIGM GEDQQRPSLS LWLNQGNHHQ MNNTNNNNNN PSDMGQNSGL  300
YVSSGLPEIM QMAHANNNAL IGSNSPMMSN YGVPVTNSTT ANLSLSSLPI GKRVESSGNS  360
DLASIYSDGQ NKQSSKPASP MSATALLQKA AQMGSIRSNT NPSIFNGSFG VMTSSSSQQE  420
NFASTSSAVA MLGNAANFSS LSHSSNSFDQ LMMQTNQSES MKLKILSGSN SAEHNLTRDF  480
LGVSGGGGGA GPQFLPQELA KFASLGSPMG LTQFTGNQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	93	105	KLRQRSNKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-101	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW21084