PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW21218
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 245aa    MW: 26789.2 Da    PI: 6.7345
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW21218genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260127.27.9e-4081071100
    DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
               +CaaCk+++rkC ++C +apyfp e+ ++f+ vhk+FG +nv+k+l++l++++reda++slvy+Aear+rdPv+G++g+i++lq +l+q k++++++ ee
  OIW21218   8 PCAACKHMKRKCIPECLFAPYFPPENLQRFEQVHKVFGSNNVMKILRELNPSQREDAVKSLVYQAEARLRDPVNGCMGFISELQDRLNQIKTNINSTMEE 107
               7*******************************************************************************************99987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MSSSHGPPCA ACKHMKRKCI PECLFAPYFP PENLQRFEQV HKVFGSNNVM KILRELNPSQ  60
REDAVKSLVY QAEARLRDPV NGCMGFISEL QDRLNQIKTN INSTMEEIST YLGPQAMKTL  120
EAMVENPSLV PPIGMVIPNQ HQVGNFSSSK ANGNINMEAS PSVFMGKSHD KLVNQDDKQQ  180
PLLEAQQLDT VGKLASGGGG GGGSDVQDVN LGTINDVSTH QIQHQKGETH TLDSHSPHHP  240
KDAQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66870.15e-47LBD family protein