PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21272

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 435aa MW: 48351.5 Da PI: 9.0308

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21272	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5.1e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H OIW21272 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	13.8	0.00017	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s++k H +t+ OIW21272 134 WVCERCSKGYAVQSDFKAHVKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MLLANNSLSP PSSDPFSCGE NGISASNTRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVRKRVFVC PEPSCLHHDP CHALGDLVGI 120 KKHFRRKHST HKQWVCERCS KGYAVQSDFK AHVKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACTLGKIRQE PQTLQAPCLS RTASSPSPSS ETNFSTAPWP PSLVIPKNHL VVKATQEKHT 240 FLNPTTTTTT IVATNAETSS KNNNSNNNKL IHPNLDLKLS TIDHHVVAVP ISLSSPKNIC 300 GNGLQLSIGS SDISDKSTQS NNSIEGEGHL REQAREELKI AMAEKAYAEE ARKQAKTQIE 360 LAELEFENAK RIRQQAQGEL NKAYGLKQHA IKQINSTMLQ ITCYSCKQHF QASSEEGGNI 420 EKNGNEKQHA KTTNS

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MLLANNSLSP PSSDPFSCGE NGISASNTRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVRKRVFVC PEPSCLHHDP CHALGDLVGI  120
KKHFRRKHST HKQWVCERCS KGYAVQSDFK AHVKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACTLGKIRQE PQTLQAPCLS RTASSPSPSS ETNFSTAPWP PSLVIPKNHL VVKATQEKHT  240
FLNPTTTTTT IVATNAETSS KNNNSNNNKL IHPNLDLKLS TIDHHVVAVP ISLSSPKNIC  300
GNGLQLSIGS SDISDKSTQS NNSIEGEGHL REQAREELKI AMAEKAYAEE ARKQAKTQIE  360
LAELEFENAK RIRQQAQGEL NKAYGLKQHA IKQINSTMLQ ITCYSCKQHF QASSEEGGNI  420
EKNGNEKQHA KTTNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-133	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW21272