PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21303

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 586aa MW: 64314.6 Da PI: 8.8854

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21303	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3e-05	75	97	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H OIW21303 75 FICEVCNKGFQREQNLQLHRRGH 97 89*******************88 PP
2	zf-C2H2	11.9	0.00071	151	173	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ OIW21303 151 WKCDKCSKKYAVQSDWKAHSKTC 173 58*****************9998 PP
3	zf-C2H2	11.1	0.0012	181	199	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr++++ +H + OIW21303 181 DCGTVFSRRDSFITHRAFC 199 8**************8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 586 aa Download sequence
MAAESSSPFL GIREDNLSQI TQHQSSTAAS SAAAPNIVPQ KRRRNQPGTP CKSLIYPDAE 60 VIALSPKTLM ATNRFICEVC NKGFQREQNL QLHRRGHNLP WKLKQKSTKD PKRKVYLCPE 120 PTCVHHDPSR ALGDLTGIKK HFSRKHGEKK WKCDKCSKKY AVQSDWKAHS KTCGTREYKC 180 DCGTVFSRRD SFITHRAFCD ALSQECARHP NGSNPLGTNL YGINNHMSLG LSQVDTQISQ 240 LQNQHQTSTN SILHLGNSGT SKLEHLIHHP LNQSSYGHTP QSIYSPALFM NAPNQAFEEH 300 QSQQGQFSNK QLHGLMQLPD LQGNNTNNTN SPSGAAPNSN NNLFNLSFFP NSTSSSTIMS 360 DQFININGGC GNQGTTLYIN NNPITVTDQV CSGMSSIFGN SVQQESVPSP HMSATALLHK 420 AAQMGSTTAT NGSSMLRGMC SSSINVTKTE RDLVSDNVAN FGSDHRREGL RSSMENDQHH 480 LHGLMNSIAN GNTSMFGNMQ GNENNLGQFA NVDESNNKLN QNLGVSFEGS DKLTLDFLGV 540 GGMVRNRNGG FLQREQQQHA MSTISSLDPK IKLAQSSQHF GSSTLQ

Sequence ? help Back to Top

Protein Sequence Length: 586 aa Download sequence

MAAESSSPFL GIREDNLSQI TQHQSSTAAS SAAAPNIVPQ KRRRNQPGTP CKSLIYPDAE  60
VIALSPKTLM ATNRFICEVC NKGFQREQNL QLHRRGHNLP WKLKQKSTKD PKRKVYLCPE  120
PTCVHHDPSR ALGDLTGIKK HFSRKHGEKK WKCDKCSKKY AVQSDWKAHS KTCGTREYKC  180
DCGTVFSRRD SFITHRAFCD ALSQECARHP NGSNPLGTNL YGINNHMSLG LSQVDTQISQ  240
LQNQHQTSTN SILHLGNSGT SKLEHLIHHP LNQSSYGHTP QSIYSPALFM NAPNQAFEEH  300
QSQQGQFSNK QLHGLMQLPD LQGNNTNNTN SPSGAAPNSN NNLFNLSFFP NSTSSSTIMS  360
DQFININGGC GNQGTTLYIN NNPITVTDQV CSGMSSIFGN SVQQESVPSP HMSATALLHK  420
AAQMGSTTAT NGSSMLRGMC SSSINVTKTE RDLVSDNVAN FGSDHRREGL RSSMENDQHH  480
LHGLMNSIAN GNTSMFGNMQ GNENNLGQFA NVDESNNKLN QNLGVSFEGS DKLTLDFLGV  540
GGMVRNRNGG FLQREQQQHA MSTISSLDPK IKLAQSSQHF GSSTLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	1e-100	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW21303