PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21365

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 163aa MW: 18442.4 Da PI: 10.4548

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21365	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.6	0.0004	38	60	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k Fs+ L H +H OIW21365 38 FECKTCNKKFSSFQALGGHRASH 60 89**********99999998887 PP
2	zf-C2H2	15.2	6.3e-05	81	103	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ Fs L H+r+H OIW21365 81 HECNICGQEFSLGQALGGHMRKH 103 79********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MTMMKRMREN QEKDTIPLAN SLMLLTKSVN KSYVSMEFEC KTCNKKFSSF QALGGHRASH 60 KRQKVIGDQE LRSDSKKPKM HECNICGQEF SLGQALGGHM RKHRAASTNE GFSSVNNVIA 120 KVPVFKRSNS KRVMCLDLNL TPLENDLKLL FGNKGPQVYL SLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	1e-46	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW21365