PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21470

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

NF-YC

Protein Properties

Length: 189aa MW: 20923.8 Da PI: 5.0044

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21470	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	174.5	1.1e-54	1	102	4	102
NF-YC 4 sfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 +fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdivprde+ OIW21470 1 MFWNYQrqeIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI 101 6999887789*****************************************************************************************97 PP NF-YC 102 k 102 k OIW21470 102 K 102 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MFWNYQRQEI EHVNDFKNHQ LPLARIKKIM KADEDVRMIS AEAPILFAKA CELFILELTI 60 RSWLHAEENK RRTLQKNDIA AAITRTDIFD FLVDIVPRDE IKDDAALAAG AILGATASGV 120 PYYYPPIGQP AGGMMIGRPA VDPATGVYVQ PPSQAWQSVW QTAAEDGSYG SGVSNGQGNL 180 DGQRYVCLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	77	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	2e-99	NF-YC family protein

Link Out ? help Back to Top
Ensembl	OIW21470