PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21530

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

YABBY

Protein Properties

Length: 154aa MW: 17162.6 Da PI: 9.705

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21530	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	88	2.5e-27	10	129	2	135
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102 d++ s+++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l l+++ + ++ +d++l +++ +++ k +++s+s ss + OIW21530 10 DLVPPSDHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSF--LSTRPPYSPQNQTIDHTL-----TLQGFYGDSK-----KGRASSSSSSS---T 95 78899***********************************9855..444444444444433332.....2222222221.....12222222222...2 PP YABBY 103 enedeevprvpp.virPPekrqrvPsaynrfike 135 ++++ +p++ p v++PPek+ r Psaynrf+k+ OIW21530 96 TSNESVSPKAAPfVVKPPEKKHRLPSAYNRFMKN 129 3445566776666*****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 154 aa Download sequence
MNHEEKVTMD LVPPSDHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP 60 PYSPQNQTID HTLTLQGFYG DSKKGRASSS SSSSTTSNES VSPKAAPFVV KPPEKKHRLP 120 SAYNRFMKNK KICGKGDVGR DWKNAIMHHY LSFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	3e-39	YABBY family protein

Link Out ? help Back to Top
Ensembl	OIW21530