PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21686

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

HD-ZIP

Protein Properties

Length: 234aa MW: 27967.3 Da PI: 8.304

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21686	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.2	6.9e-19	40	94	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le Fe+++ + +++ +LA+ lgL+ rqV +WFqNrRa++k OIW21686 40 KNKRRFSDEQIRSLEIIFESESMLEPRKKLQLARDLGLQPRQVAIWFQNRRARWK 94 67889*************************************************9 PP
2	HD-ZIP_I/II	117.6	6.8e-38	41	132	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+++LE Fe+e+ Lep++K +lar+Lglqprqva+WFqnrRAR+k+k++E++y++L+++yd+l+++ e+L++e+e+L+ +l++ OIW21686 41 NKRRFSDEQIRSLEIIFESESMLEPRKKLQLARDLGLQPRQVAIWFQNRRARWKSKRMEQEYRKLRDEYDKLASRFESLKNEKESLQLQLQK 132 79*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MMEEDKYIQA STKGKNVQSF SSCSEPQHQN PRKKKNKLEK NKRRFSDEQI RSLEIIFESE 60 SMLEPRKKLQ LARDLGLQPR QVAIWFQNRR ARWKSKRMEQ EYRKLRDEYD KLASRFESLK 120 NEKESLQLQL QKLRELVGTC YDGRREMKGG KENSTEKGGL EDRECMNYSD DQNEKNIRSE 180 KSEERGQEQH HVLRMDEHEE ILPLASTLEK WYNVDPNGSL DQPCSSSQWL DFWT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	32	43	RKKKNKLEKNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.2	6e-35	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	OIW21686