PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21708

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 568aa MW: 62648.5 Da PI: 7.8818

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21708	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.6	1.2e-09	352	399	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P++ +k Ka +L + ++Y++sLq OIW21708 352 SHSLAERVRREKISERMKLLQDLVPSC----NKVIGKALMLDEIINYVQSLQ 399 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MWQSSSSSPS TMDVQQATIL NNSQSDQTQN CFYNNQTWDK SSDQNNLKFD SALSSMVSSP 60 AGSNSNMSSE NFVIRELIGK LGNIGGCNDE ILPHSQYQQS FVAPSYGNKN NNNSTNTSCY 120 STPLSSPPKL NINNNLVKPM MALNSSSTVA EFSTDPGFAE RAAKFSCFGS RSFNGRKTQL 180 GLNNNHEMSQ RSNLLMENVK LTRVSSSPSL KVLGIGSQIG IQENKNSPMK VVTSQEESTI 240 SQQNPNGDNG GKPSSYMNSR KRKVSSKGKA KEISTSAMGI SLHAHEASED SNAKRYKSNE 300 GDGNGPMKEE EESKEGGSNG SEDKHIKGNS KQPEPPKDYI HVRARRGQAT DSHSLAERVR 360 REKISERMKL LQDLVPSCNK VIGKALMLDE IINYVQSLQR QVEFLSMKLA TVNTRMDFNI 420 ESLIAKDIFQ SNNSLAHPTL PLDSSAQGFY GQQQPQNSTI HNNILNGDVS HNSMDTLDDS 480 VYQNIAMQLS SLNESGSQYP VAFSEGDLNA IVQMGFGQTT NRKSPQSQSF NVSFFCLMQA 540 QIKYTYENEA MFQPFITPEL KHRGLGRF

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MWQSSSSSPS TMDVQQATIL NNSQSDQTQN CFYNNQTWDK SSDQNNLKFD SALSSMVSSP  60
AGSNSNMSSE NFVIRELIGK LGNIGGCNDE ILPHSQYQQS FVAPSYGNKN NNNSTNTSCY  120
STPLSSPPKL NINNNLVKPM MALNSSSTVA EFSTDPGFAE RAAKFSCFGS RSFNGRKTQL  180
GLNNNHEMSQ RSNLLMENVK LTRVSSSPSL KVLGIGSQIG IQENKNSPMK VVTSQEESTI  240
SQQNPNGDNG GKPSSYMNSR KRKVSSKGKA KEISTSAMGI SLHAHEASED SNAKRYKSNE  300
GDGNGPMKEE EESKEGGSNG SEDKHIKGNS KQPEPPKDYI HVRARRGQAT DSHSLAERVR  360
REKISERMKL LQDLVPSCNK VIGKALMLDE IINYVQSLQR QVEFLSMKLA TVNTRMDFNI  420
ESLIAKDIFQ SNNSLAHPTL PLDSSAQGFY GQQQPQNSTI HNNILNGDVS HNSMDTLDDS  480
VYQNIAMQLS SLNESGSQYP VAFSEGDLNA IVQMGFGQTT NRKSPQSQSF NVSFFCLMQA  540
QIKYTYENEA MFQPFITPEL KHRGLGRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-98	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW21708