PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW21715

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 408aa MW: 44852.3 Da PI: 9.8913

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW21715	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.8	8.9e-06	167	190	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y C+ Cg++Fs ++L+ H+ + H OIW21715 167 YACSQCGEVFSKMESLELHQAVrH 190 89******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MALLTFLPEK SNPKKKQQLP KHKHKQKQKE KEKQKQPSSW DQIKNLITCK QIEGSRVHDP 60 SKVGYSKLRC SCSSICRDVI HGNTRVVHRA DNSSPESSTL GQETGLLTRK PHTPGSSSTR 120 SGKSNGGATY TSSSSRGIHQ FRKLSGCYEC HMIIDPSRVP IPRSTVYACS QCGEVFSKME 180 SLELHQAVRH AVSELGPEDS GRNIVEIIFQ SSWLRNNGPM CKIERILKVQ NSQRTIQRFE 240 DCRDTVKTRA LNSTRKNPRC AADGNELLRF HCTTLTCALG SRGSSALCAA VPGCGVCTVI 300 RHGFRGGDGC KGVRTTASSG RAHDSVQCGG GESRRAMLVC RVIAGRVKRV VEDAPLLLEE 360 ENVSVVGSYD SVAGQRGIYS NLEELLVFNP RAILPCFLVI YKVLPSSK

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MALLTFLPEK SNPKKKQQLP KHKHKQKQKE KEKQKQPSSW DQIKNLITCK QIEGSRVHDP  60
SKVGYSKLRC SCSSICRDVI HGNTRVVHRA DNSSPESSTL GQETGLLTRK PHTPGSSSTR  120
SGKSNGGATY TSSSSRGIHQ FRKLSGCYEC HMIIDPSRVP IPRSTVYACS QCGEVFSKME  180
SLELHQAVRH AVSELGPEDS GRNIVEIIFQ SSWLRNNGPM CKIERILKVQ NSQRTIQRFE  240
DCRDTVKTRA LNSTRKNPRC AADGNELLRF HCTTLTCALG SRGSSALCAA VPGCGVCTVI  300
RHGFRGGDGC KGVRTTASSG RAHDSVQCGG GESRRAMLVC RVIAGRVKRV VEDAPLLLEE  360
ENVSVVGSYD SVAGQRGIYS NLEELLVFNP RAILPCFLVI YKVLPSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-165	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW21715