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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW21841 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | bHLH | ||||||||
| Protein Properties | Length: 337aa MW: 37987.7 Da PI: 5.2587 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 40.4 | 5.2e-13 | 135 | 186 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ + Lr+l+P++ + ++ + a+i A++++k+L+
OIW21841 135 QRMTHIAVERNRRKQMNEYLTVLRTLMPSS---YVQRGDQASIIGGAINFVKELE 186
79****************************...9******************995 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 337 aa Download sequence |
MTLEAVVFQQ DPFSYGCNKD YLYPLVGEGA KSTCEQAWSQ DYGFQTSAEE EKLLLGIINN 60 NIEQSLHATT WDSSSTSVLQ NTKEHWDYSH SSPEACTVDQ SLTAPISSLE TTTVTTATGR 120 RKRRRTKNKE EIENQRMTHI AVERNRRKQM NEYLTVLRTL MPSSYVQRGD QASIIGGAIN 180 FVKELEQLLQ SMEGQKNIKQ PHQENFGLNG SLPFAEFFTF PQYTTCENQK NNIGTTMGQN 240 QEQKQWGVAD IEVTMVDSHA NMKILSKKRS GQLMKIVDGL QSLRLGILHL NVTTVDDMVL 300 YSVSVKVEEG CQLNTVDEIA AAVNQLLRTI QEEAAFN |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 121 | 125 | RKRRR |
| 2 | 121 | 126 | RKRRRT |
| 3 | 121 | 128 | RKRRRTKN |
| 4 | 136 | 147 | RMTHIAVERNRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G72210.1 | 1e-89 | bHLH family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW21841 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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