PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW21915
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 25165.8 Da    PI: 9.6532
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW21915genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.32.7e-30959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              k+ien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s
  OIW21915  9 KFIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS 59
              79***********************************************86 PP
2K-box87.33e-2981170897
     K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
               +  e+++++l+qe++ + ++i+ L+ ++R+llGe+L+s+s+ eLq++e+qLe+s+ ++R++K+++++eqi++l++kek l  en +L+ k
  OIW21915  81 RSVEQNMQHLKQEASSMMEKIDLLEASKRKLLGEGLGSCSIDELQEIEKQLERSVGNVRARKTQVFKEQIQQLKEKEKTLVAENCRLSLK 170
               467899*******************************************************************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MVRGKTQMKF IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIVFSP RGKLYEFASS  60
SMQETIERYR RHARDTPTTP RSVEQNMQHL KQEASSMMEK IDLLEASKRK LLGEGLGSCS  120
IDELQEIEKQ LERSVGNVRA RKTQVFKEQI QQLKEKEKTL VAENCRLSLK YGICPQPATK  180
DQREKQPEPY AESSSPSNSD VETELFIGLP ETRPRRISPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.14e-87MIKC_MADS family protein