PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW21954
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family HD-ZIP
Protein Properties Length: 223aa    MW: 25725.5 Da    PI: 8.7419
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW21954genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.52.7e-1989143256
               T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
  Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
               rk+ ++tkeq   Lee F+ + ++s ++++eLA+kl+L  rqV vWFqNrRa+ k
  OIW21954  89 RKKLRLTKEQSALLEESFNLHVTLSPAQKQELADKLNLRHRQVEVWFQNRRARTK 143
               78889************************************************98 PP
2HD-ZIP_I/II107.21.2e-3489176188
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 
                  +kk+rl+keq++lLEesF+ + +L+p +K+ela +L+l+ rqv+vWFqnrRARtk+kq  +d+e+Lk+++++l++en rL+ke +eLr
     OIW21954  89 RKKLRLTKEQSALLEESFNLHVTLSPAQKQELADKLNLRHRQVEVWFQNRRARTKLKQRVVDCEFLKKCCEKLTNENLRLKKELQELR 176
                  69*************************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MEDDKACTLG LSLEMGISGG YVPKKDKQKV HKSVPCLDLS FDLYPKEEDI DVNHYDGAKG  60
FNLKRIIEEE QQDPNSMISD NINNKNCSRK KLRLTKEQSA LLEESFNLHV TLSPAQKQEL  120
ADKLNLRHRQ VEVWFQNRRA RTKLKQRVVD CEFLKKCCEK LTNENLRLKK ELQELRVLKV  180
NISNIATLTT CSSCNKELLK PNEGNNIHKK LQSSIELEST IRT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18894SRKKLRL
2138146RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.11e-46HD-ZIP family protein