PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW21957
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 61aa    MW: 6779.88 Da    PI: 11.0659
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW21957genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.34.3e-281059251
              ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v+ifsst kly++ss
  OIW21957 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVVIFSSTSKLYDFSS 59
              8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVVIFSS TSKLYDFSST  60
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14210.15e-35MIKC_MADS family protein