PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW22012

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 471aa MW: 52467.4 Da PI: 8.5617

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW22012	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	97	119	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H OIW22012 97 FICEICNKGFQRDQNLQLHRRGH 119 89*******************88 PP
2	zf-C2H2	12.2	0.00055	174	196	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ OIW22012 174 WKCDKCSKKYAVQSDWKAHSKTC 196 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MNVLMFQQQQ QQHQQTLLVE ENMSNLTSAS GEASASSGTR TEIGNSSNYP QQQYLAPPPS 60 SQAQPQAKRK RNLPGNPDPD SEVIALSPKT LMATNRFICE ICNKGFQRDQ NLQLHRRGHN 120 LPWKLKQRTN KEIIRKKVYV CPEESCVHHD PLRALGDLTG IKKHFCRKHG EKKWKCDKCS 180 KKYAVQSDWK AHSKTCGTRE YRCDCGTLFS RRDSFITHRA FCDALAEESA RGTIPNHHSS 240 LLQSSLLQTH DHQDNNIHAN NNIFSLKKEQ QSFSLISPQI MPPWLGPQSN NNINNNNNNT 300 LDFSSTSSIF SHHHHHYQDQ TSNPNPSSLG PTTLVPVVQP VTSPHMSATA LLQKAAQMGA 360 TMTKPDHVTM STTAGGVSHS SFLNHVMFEG TSFEDAFGGI LNSNNENNII QKTNNGDNDG 420 GGRGNEAMTR DFLGLKPLSH SDFLTIASMG NCMNSSNSHH QQNQSPNPWQ G

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MNVLMFQQQQ QQHQQTLLVE ENMSNLTSAS GEASASSGTR TEIGNSSNYP QQQYLAPPPS  60
SQAQPQAKRK RNLPGNPDPD SEVIALSPKT LMATNRFICE ICNKGFQRDQ NLQLHRRGHN  120
LPWKLKQRTN KEIIRKKVYV CPEESCVHHD PLRALGDLTG IKKHFCRKHG EKKWKCDKCS  180
KKYAVQSDWK AHSKTCGTRE YRCDCGTLFS RRDSFITHRA FCDALAEESA RGTIPNHHSS  240
LLQSSLLQTH DHQDNNIHAN NNIFSLKKEQ QSFSLISPQI MPPWLGPQSN NNINNNNNNT  300
LDFSSTSSIF SHHHHHYQDQ TSNPNPSSLG PTTLVPVVQP VTSPHMSATA LLQKAAQMGA  360
TMTKPDHVTM STTAGGVSHS SFLNHVMFEG TSFEDAFGGI LNSNNENNII QKTNNGDNDG  420
GGRGNEAMTR DFLGLKPLSH SDFLTIASMG NCMNSSNSHH QQNQSPNPWQ G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	137	KLKQRTNKEIIRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-103	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW22012