PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW22068

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 79aa MW: 8969.88 Da PI: 6.0819

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW22068	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.5	4.9e-05	2	22	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C +Cgk F + + ++H +++ OIW22068 2 CRKCGKAFAVRGDWRTHEKNC 22 *****************9987 PP
2	zf-C2H2	11.1	0.0012	29	45	5	21
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 +Cg F++k +Lk Hi+ OIW22068 29 ICGSDFKHKRSLKDHIK 45 8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 79 aa Download sequence
MCRKCGKAFA VRGDWRTHEK NCGKLWYCIC GSDFKHKRSL KDHIKAFGNG HAAYGIDGFE 60 EEDEPASEVE QDNDDSTTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	4e-49	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW22068