PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO50474
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family C2H2
Protein Properties Length: 57aa    MW: 6803.77 Da    PI: 9.3215
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO50474genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.3e-05326123
              EEETTTTEEESSHHHHHHHHHH.T CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirt.H 23
              y C++C++ +++      H+++ H
  OMO50474  3 YICNICNENYRNLVGVIEHQKMeH 26
              89*******************999 PP
2zf-C2H2163.5e-053353121
              EEETTTTEEESSHHHHHHHHH CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHir 21
              ykC +C++ F +k+  ++H +
  OMO50474 33 YKCDKCKRGFATKEARNKHRN 53
              9******************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 57 aa     Download sequence    
MAYICNICNE NYRNLVGVIE HQKMEHTKEE TKYKCDKCKR GFATKEARNK HRNNVTN