PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO50946

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 145aa MW: 17014 Da PI: 6.2788

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO50946	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.3	1.1e-15	58	111	4	57
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +++rr+++NRe+ArrsR RKk +e+L+++v L eN++Lk++l+ +++ OMO50946 58 ERKQRRMISNRESARRSRWRKKRHMENLTDEVNRLNIENQQLKNRLSLVMNQCH 111 589*********************************************999995 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MFIGEEAVQF EKPVHFETGF TPEELEELLS FLESNEPASP NNSAGSDGSS RAIYTADERK 60 QRRMISNRES ARRSRWRKKR HMENLTDEVN RLNIENQQLK NRLSLVMNQC HVVWRENQQL 120 RSESEALWGK LLDLYWTLAA MQSQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59530.1	1e-22	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO50946