PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO52570
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family G2-like
Protein Properties Length: 321aa    MW: 36574.5 Da    PI: 5.8646
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO52570genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.83.2e-30253307256
   G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
               +r++W+peLH+rFvea++  GG+e+AtPk+i+++mkv+gLt+++vkSHLQkYRl+
  OMO52570 253 NRRCWSPELHARFVEALNLFGGIEVATPKQIRDMMKVEGLTIDQVKSHLQKYRLH 307
               79***************************************************97 PP
2Myb_DNA-binding42.61.4e-13254305148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ ++v+a +++Gg    t+k I  +m  +g+t  q+ks++qky+
         OMO52570 254 RRCWSPELHARFVEALNLFGGIevaTPKQIRDMMKvEGLTIDQVKSHLQKYR 305
                      568*****************88*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MIHSVELSLS LKPSYVPKSV SNLLSDVSKI DNKSDKLSVL SDYICKYEEE LSIIEALKRD  60
ELPQCRQLLM DAIETLKEEV MIINNTMDSE AGQPLVEYLP TKRKNNDEQE EEKEIWESCY  120
NEEETSYGNP SYAKKQKALV LEDNFHQVFE EKDQPSILRA IQHEVPICKE RNMEGFLLLP  180
CKADHGSGVG SNSPGSSSTA KEKEEVAVAA LVPGVQYHQS STSRHQGFLC VNNNPTLNNY  240
YPRPLTQPIW KNNRRCWSPE LHARFVEALN LFGGIEVATP KQIRDMMKVE GLTIDQVKSH  300
LQKYRLHCGK VLAASYVDRF R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.15e-24G2-like family protein