PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO53225
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family G2-like
Protein Properties Length: 114aa    MW: 12029.5 Da    PI: 10.9557
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO53225genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.53.8e-101233355
   G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55
              ++lm+v+gLt+e+v+SHLQkY l
  OMO53225  1 MQLMSVDGLTRENVASHLQKYHL 23
              79*******************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MQLMSVDGLT RENVASHLQK YHLYLKRMQG LSGGGGGRVA GANRGAGGGA STDPTTNHLF  60
ASSPVPPHFL HPGRGNSEHF LPFVPVPALQ HHQQQQIVAA VSQRPGPGST GSYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.17e-25G2-like family protein