PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO53534

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 143aa MW: 16453.9 Da PI: 7.076

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO53534	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.2	2.3e-10	28	78	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 k+ +r+ +NRe+ArrsR +K++ +e L ++v++L+ae ++ ++ e l ++ OMO53534 28 KKRKRMLSNRESARRSRMKKQKLLEDLVNEVASLKAEIRKNSDNFEILMQK 78 899**********************************86555555555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MLNHPLPQMS SGSEAEARGG DGMIMDEKKR KRMLSNRESA RRSRMKKQKL LEDLVNEVAS 60 LKAEIRKNSD NFEILMQKTL VLESENNLLE AEKMDLAHHL RNLELIQTHM ELLQMNNNNL 120 ESWQCHGSSQ PMPIMASAGM FNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G62420.1	4e-24	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO53534