PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO53938
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family C2H2
Protein Properties Length: 67aa    MW: 7761.74 Da    PI: 8.6493
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO53938genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.91.9e-061637323
              ETTTTEEESSHHHHHHHHHH.T CS
   zf-C2H2  3 CpdCgksFsrksnLkrHirt.H 23
              C++Cgk F++  +  +H++  H
  OMO53938 16 CNICGKAFKSFALVLKHQKEdH 37
              *******************988 PP
2zf-C2H211.90.00074465122
              EEETTTTEEESSHHHHHHHHHH CS
   zf-C2H2  1 ykCpdCgksFsrksnLkrHirt 22
              ykC  C++ F+++     H   
  OMO53938 44 YKCDLCKRGFPTRAARIEHRDY 65
              9***********9988888765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    
MNAEENASRN DYDSLCNICG KAFKSFALVL KHQKEDHTKA ETKYKCDLCK RGFPTRAARI  60
EHRDYGH