PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO56019
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family EIL
Protein Properties Length: 444aa    MW: 50178.8 Da    PI: 5.5196
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO56019genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3391.98.6e-120430828353
               XXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX... CS
      EIN3  28 keaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqte 128
               k ++ ++++s+ ++e++rrkkmsraQD+iLkYM+k+mevc+aqGfvYgi+pekgkpv+g+sdsLr+WWke v+fd+ +p ai +     +il+++  +   
  OMO56019   4 KRENDEETESEARQEASRRKKMSRAQDSILKYMVKIMEVCKAQGFVYGIVPEKGKPVTGSSDSLRKWWKERVRFDKSAPLAIQEF--LPVILEQGALD--- 99 
               444456678899**********************************************************************987..45787766655... PP

               .XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTT CS
      EIN3 129 rsseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeireler 229
               + s  h+l+elqDTtlgSLLsalmqhc ppqrrfplekg++pPWWPtG+e wwge+g+++++g+ppy+kphdlkkawkvsvLtavikhmsp+++++r+l+ 
  OMO56019 100 PVSCIHMLQELQDTTLGSLLSALMQHCLPPQRRFPLEKGLAPPWWPTGEEIWWGEQGVAQEHGPPPYRKPHDLKKAWKVSVLTAVIKHMSPNLDRMRRLVT 200
               89*************************************************************************************************** PP

               TSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......X CS
      EIN3 230 qskylqdkmsakesfallsvlnqeekecatvsahssslrkqspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcq 330
               qsk+lqdkm+ake++++++v+n+ee++++        l+++  k+ +s+++ e+ +g+++ k       k+++ ++  +  k+k + ++ v ++   + cq
  OMO56019 201 QSKCLQDKMTAKETATWSKVVNSEEALLK--------LTEKCLKISASKDDGEEETGHDKGK-------KAKNPIASSSDHKRKCVFEREVTINT-LYACQ 285
               *************************9773........3333344444444444333333333.......33334444444445567777777774.6**** PP

               XXXXXX.XXXXXXXXXXXXXXXX CS
      EIN3 331 ssqfrgsetelifadknsisqne 353
               + ++++s++el+f  k+s+ ++e
  OMO56019 286 NLECPHSSSELGFMGKSSRIDHE 308
               *****************998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MKQKRENDEE TESEARQEAS RRKKMSRAQD SILKYMVKIM EVCKAQGFVY GIVPEKGKPV  60
TGSSDSLRKW WKERVRFDKS APLAIQEFLP VILEQGALDP VSCIHMLQEL QDTTLGSLLS  120
ALMQHCLPPQ RRFPLEKGLA PPWWPTGEEI WWGEQGVAQE HGPPPYRKPH DLKKAWKVSV  180
LTAVIKHMSP NLDRMRRLVT QSKCLQDKMT AKETATWSKV VNSEEALLKL TEKCLKISAS  240
KDDGEEETGH DKGKKAKNPI ASSSDHKRKC VFEREVTINT LYACQNLECP HSSSELGFMG  300
KSSRIDHEFV CAYRSEASET SQDNSEESDI SANSLIPYNQ HSFGTQSADS IVGKQSILPV  360
TDWLDMELLK PNDHQQMNEV EGMPEAVLHD YINYLSGTGT AIEGLPFPEE FLIPRGDMDL  420
NSSPLSKENL DDQGVTSIWD WAFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-132EIL family protein