PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO56720
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family G2-like
Protein Properties Length: 341aa    MW: 38296.2 Da    PI: 8.3671
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO56720genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.14.1e-33209264156
   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
               k+r++W+peLH+rFvea++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  OMO56720 209 KQRRCWSPELHRRFVEALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 264
               79****************************************************97 PP
2Myb_DNA-binding46.58.2e-15211262148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W++e++ ++v+a +qlGg    t+k I + m+  g+t  ++ks++qky+
         OMO56720 211 RRCWSPELHRRFVEALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 262
                      568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MDLSLDLSLV YVPKSISEFL KEVSKIKNGF QRLSKITDYV KRLEEEMKKI DAFKRELPLC  60
MLLLKDGIER LKEEEMQCKE KNDGSVTEEL MLPLKRKSEE NGRVNLEKDG GDKKNWMSSV  120
QLWNSDVNNV DHNKKPNTVP ELKLEISGLS LMTPNSELAS CNPILKSNGS CRIGSGSSLY  180
SEQNQIKFQA KSLVSHHQQQ QQQQQNSRKQ RRCWSPELHR RFVEALQQLG GSQVATPKQI  240
RELMQVDGLT NDEVKSHLQK YRLHIRKLPA SSAGKGDGLW SAENQCNAHM KSNNSQSGSP  300
QGPLLASGSG KGMSSTGGDS MEEDDEKSDG QSWRSGVHND V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.11e-61G2-like family protein