PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO56774

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

Dof

Protein Properties

Length: 248aa MW: 25495.3 Da PI: 8.4938

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO56774	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.2	9e-39	24	84	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s OMO56774 24 EQEQLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRKNAKRS 84 57899****************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MPSDSGDSNR RLTKALNSGA PPPEQEQLPC PRCDSTNTKF CYYNNYNFSQ PRHFCKSCRR 60 YWTHGGTLRD IPVGGGTRKN AKRSRTATSI ATSHATIMSA TNAATTTTTS HHHNYPLPAT 120 PVLLPLSANQ GSFGIGGESK GNGGGNLCGS FTSLLNTQGP AGFLALGGFG LGIGPGLEDV 180 GFGLGRGMWP FSGMGDGAAA TVGGGHGGAA TGMGNSWQFE SGETGFVGGG DCFSWPDLAI 240 STPGNGLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	9e-52	Dof family protein

Link Out ? help Back to Top
Ensembl	OMO56774