PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO56856

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 346aa MW: 36278.8 Da PI: 5.7208

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO56856	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	74.7	1.3e-23	249	311	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L +eN+ L++el++l++e++kl+se+ OMO56856 249 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVESLANENRNLRDELKKLSDECEKLTSEN 311 89***********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGAEEESTPA KPSKPTASTQ EIPTTPSYTD WSTSMQAYYG AGATPPPFFA STVASPAPHP 60 YIWGGQHPLM PPYGTPVPYP AMYPPGGVYA HPNMAVTPSS AHNNADQEGK GTEGKDRAAA 120 KKVKGTTGNK VGESAKAASG SGNDGGSQSG ESGSEGTSDG SDENNHQEHA AGKKGSFDQM 180 LADANAQSGA LVPGKPVVSM PATNLNIGMD LWSGSPAAAG AAKMRPNSSG AVAAVAPGGV 240 MADQWIQDER ELKRQKRKQS NRESARRSRL RKQAECEELQ ARVESLANEN RNLRDELKKL 300 SDECEKLTSE NGSIKDELTR ICGPDAVTNL EQENPSLQSR GAEGNS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGAEEESTPA KPSKPTASTQ EIPTTPSYTD WSTSMQAYYG AGATPPPFFA STVASPAPHP  60
YIWGGQHPLM PPYGTPVPYP AMYPPGGVYA HPNMAVTPSS AHNNADQEGK GTEGKDRAAA  120
KKVKGTTGNK VGESAKAASG SGNDGGSQSG ESGSEGTSDG SDENNHQEHA AGKKGSFDQM  180
LADANAQSGA LVPGKPVVSM PATNLNIGMD LWSGSPAAAG AAKMRPNSSG AVAAVAPGGV  240
MADQWIQDER ELKRQKRKQS NRESARRSRL RKQAECEELQ ARVESLANEN RNLRDELKKL  300
SDECEKLTSE NGSIKDELTR ICGPDAVTNL EQENPSLQSR GAEGNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	266	272	RRSRLRK
2	266	273	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36730.1	1e-104	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO56856