PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO56977

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 161aa MW: 18344.5 Da PI: 5.7071

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO56977	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	38.4	2.7e-12	33	91	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +r+ +NRe+ArrsR RK++ ++ L+e v +L++ + + ++ ++++ +l++e+ OMO56977 33 RKRKRMLSNRESARRSRMRKQKHLDDLTEQVSQLTKDKNQILSSMNVTTQLYLNLEAEN 91 57899*******************************99999999999999999999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MATSSTGASS ASSTLLRSSS SEEDFQKIPV DERKRKRMLS NRESARRSRM RKQKHLDDLT 60 EQVSQLTKDK NQILSSMNVT TQLYLNLEAE NSILRAQMAE LSSRLQSLNE IVDFINTSNG 120 VFENDHFDHQ INDFDAFNMN PWGSFAVNNQ PIMASADMIM Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	54	RKRKRMLSNRESARRSRMRKQK
2	46	53	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18160.1	2e-50	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO56977