PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO57183
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family NAC
Protein Properties Length: 192aa    MW: 22017.5 Da    PI: 5.2397
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO57183genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.75e-153176248
       NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
              ppG+rF+P+deelvv+yL+kk+ +++l+l ++ikev++y ++P++L 
  OMO57183 31 PPGIRFRPRDEELVVFYLRKKLLDQPLPL-NMIKEVELYAHHPQELV 76
              9****************************.89**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MSLIRQNHRA NVAQNRVLTQ EQVQAVFDLY PPGIRFRPRD EELVVFYLRK KLLDQPLPLN  60
MIKEVELYAH HPQELVGSGS LGGNDQASHA LAQPFNNLKR LRLDDVSKSK LDDDSPKLKL  120
DESDDQYANG VASITPKYPN YYNEVICDQS SSSFVGNNLH DPYDDYNMNF MADPSFDGLG  180
FLNQEFHGHH YY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-12NAC family protein