PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO57237
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family GATA
Protein Properties Length: 221aa    MW: 25249.2 Da    PI: 7.7487
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO57237genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.12.4e-18155189135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               Cs+C++ kTp+WR gp g+ktLCnaCG++y++ +l
  OMO57237 155 CSHCRSEKTPQWRMGPLGPKTLCNACGVRYKSGRL 189
               *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MAVEDINGDN NNNNNNSNMN DLSLPGDDLE EFFGFESQLC VPQDSLDDID WFPNFTDEFI  60
SLDGIFLTPE HDLLSEDCSA WKNKKRPRAA VVEEQGVKNN SIVPFATKKQ RSKRSGGGYG  120
KRGCWSAKQL EEKDYNYSTK SEELDEEWNK EKRKCSHCRS EKTPQWRMGP LGPKTLCNAC  180
GVRYKSGRLV AEYRPAASPT FDSVKHSNFH KKILRRKGFK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-34GATA family protein