PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO57257
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family MYB_related
Protein Properties Length: 281aa    MW: 30808.7 Da    PI: 9.872
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO57257genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.4e-1461105347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
         OMO57257  61 PWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 105
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MLFGVRVTEG GGSAFRKSVS MNNLSQFDDQ PPADSNADAG YASDDVIHAS GRSRERKRGV  60
PWTEEEHRLF LLGLQKVGKG DWRGISRNFV KTRTPTQVAS HAQKYFLRRN NQNRRRRRSS  120
LFDITTDSFM NSTIFEEEEQ VQQENVLAPP PLPLPQPHAK MNGGFPMATF PVSLSNPVVL  180
PVNGESSNSM EMENLTLGTN PKASMSPKLI RPIPIFPIPP SSKMADLNLN QKTQVVDPLP  240
LTLKLSTPST EEQSSAAAHS STFQAMSGGS DSNSNSIISV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.23e-69MYB_related family protein