PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO57970

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 324aa MW: 35825.9 Da PI: 9.0371

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO57970	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	27.7	5.8e-09	161	219	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK ++ eLe+kv++L++e + L ++ +l+ l++e+ OMO57970 161 KRAKRILANRQSAARSKERKIRYTNELERKVQTLQTEATNLSAQVTMLQRDTTGLTTEN 219 9********************************************99998888777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MPPRGAHHRR AHSDTAFRFD DFLLFDPSDL DLSSLDLPAS SSNPAPPPVI PVPADSSDDS 60 SSNGPARSSH NNPRHISSHL RSLSVDSDFF DGLGLTGPAI SGGTGDEKFG GKTGVGEKRV 120 HHRHSNSMDG SFEVESLMAV DGVKKAMAPD RLAELALIDP KRAKRILANR QSAARSKERK 180 IRYTNELERK VQTLQTEATN LSAQVTMLQR DTTGLTTENK ELKLRLQAME QQAQLRDALN 240 EALREEVQRL KIQAGQMSAM NGHPFNRGLP PQFMPQQPGP HHFGGHQTSQ QQQQQQLQMP 300 QSSTNNQTLN GQPQPHFMDF NQRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G43700.1	3e-79	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO57970