PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO58203
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family NAC
Protein Properties Length: 61aa    MW: 7189.31 Da    PI: 9.8801
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO58203genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.89.8e-11753248
       NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp 48
               pGfrF+Pt e ++++yL++ + g kl   ++++e+diyk  ePw+L 
  OMO58203  7 RPGFRFKPTREVILQYYLRAAIIGGKLAS-DIFTEADIYKDkEPWKLF 53
              79************************999.99*******9769****5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    
MSLQSLRPGF RFKPTREVIL QYYLRAAIIG GKLASDIFTE ADIYKDKEPW KLFNLNHTHS  60
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.34e-11NAC family protein