PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO59189
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family B3
Protein Properties Length: 61aa    MW: 6961.89 Da    PI: 8.474
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO59189genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.53.2e-151513483
              SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEE CS
        B3 34 ktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFk 83
              ++l ++de+grsW++ ++ rk + +  vl+kGW++Fv angL +gD v+++
  OMO59189  1 MELEVKDENGRSWNFVCSLRKAGYAkPVLQKGWRDFVVANGLTVGDKVTIY 51
              5799*************997777667***********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 61 aa     Download sequence    
MELEVKDENG RSWNFVCSLR KAGYAKPVLQ KGWRDFVVAN GLTVGDKVTI YQHEYSNDGI  60
K