PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO59190
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family B3
Protein Properties Length: 134aa    MW: 15401 Da    PI: 11.1179
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO59190genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.58.6e-17896188
              EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
        B3  1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88
              f k+l  s + +++rl +p k +e +    gg + e   +++ de+ ++W++ ++   k+  + vl+kGW+ Fv+++gL+ gD v+F++  ++
  OMO59190  8 FSKKL--SPTDTLKRLAIPMKSLEFFprlcGGHEVE--IMVIDDETQQRWTFSCTLrHKGYPKPVLSKGWRAFVRSKGLQPGDKVTFHHRISQ 96
              78999..55555667********888*999666444..455566999*******7743333459************************65333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MAARRMIFSK KLSPTDTLKR LAIPMKSLEF FPRLCGGHEV EIMVIDDETQ QRWTFSCTLR  60
HKGYPKPVLS KGWRAFVRSK GLQPGDKVTF HHRISQDGIK VFGSIFPRSY YSVTIERAST  120
RLFGTATPNI NRIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.13e-09B3 family protein