PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO59608

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

VOZ

Protein Properties

Length: 1523aa MW: 171292 Da PI: 5.2587

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO59608	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	416.8	3.7e-128	1134	1359	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewl.qdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna...... 92 pppsaf+gpkcalwdctrpaqgs+w+ qdycs+fhatlalne++pg+ p++rp+gi+lkd+ll++al+ak qgk+vgip+cegaat+kspwna OMO59608 1134 PPPSAFMGPKCALWDCTRPAQGSDWWsQDYCSNFHATLALNEDPPGMPPIVRPGGISLKDNLLLDALRAKSQGKNVGIPQCEGAATMKSPWNAtdqqvs 1232 89********************8648************************************************************9333333 PP VOZ 93 ..aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelkl 189 a+lfdlsllege +rewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgg+krsyymdpqps+++ewhl+eyei+ +da+alyrlelkl OMO59608 1233 rsADLFDLSLLEGEILREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGQKRSYYMDPQPSGQYEWHLFEYEIYGCDAFALYRLELKL 1331 3347******************************************************************************************* PP VOZ 190 vdekksakgkvskdsladlqkklgrlta 217 +ekks+k kv+kdsladlqkk+grlta OMO59608 1332 GNEKKSPKVKVTKDSLADLQKKMGRLTA 1359 ************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1523 aa Download sequence
MEKAEINGPI LPSSPASNSR TVRSLASPPL QPNYSSRPVQ EALEHLASID LNELFNEAKV 60 EYCRAARDLR SCGRYVQYAL NSCGHASLCA ECSQRCDLCP ICRIPLPKSG NNRIRLRLYD 120 ECLDAGLISR RCDERKSTDV TDICMDETAV SSDAVTALLL DEKVVKDWVK RTFKNITAEL 180 QGIYYQEIKE MKDRLCSLLK FSVHLAGLSS VLEVLESSFK GRLVAQLHDL HQLQEGILKT 240 KQHLEIAMWC IRHQFLEHVK SRHANFTSWR NLVRERKAAA IDRAWPDVLD HLADSTGSVG 300 SLFIEDALAN LDIEQAYDQE VGDKSDFPFL QKNGALSFFK SKIEGMTGCY PFENLRAAVD 360 ILFLRSSSDL VVAKRAIFLY YLFDRHWSMP EEEWRPIVDD FAASFGISRH LLLESFTFCL 420 LDDHSDDALL ESRQLLPEIS GPATHPKIAQ VLLERQSPEA AQMVLRCSGR DVVFQLVSLS 480 EAVTIVRVKM ECALLTEAFT YQRMLCTKVR DKKFKYGPSG DAFDDMKGQC RSWMDWVEVL 540 VTEICCLCIR RNLVDRMIEL PWNSDEEKYI HKCLLDQATA HPSTTIGSLL VVFYLQRYRY 600 VEAYQVNLKL WSLEQEFISN NSVDEEVLSR MESQRQRRKE LVDKGIELLP EVLQQQVKTG 660 TFSDIVIASG QVDEMSASSG LSELQEPKSA LLVPSTSDSI LLRPDHMATP FRPPVFEIPK 720 GGYVDKSHVE AGDNGSSSIL QGKLFADAER ASNLEVVKNF KFDDISSPGI RRLTPTYSTP 780 VKGISWSSSR ELPNRHLQEK QSNIIILEGE QNGFVNQVRK ASPPYSRRVT ANPVSTPSSN 840 SGLFKGFANN LRSDVSGKRG QSDRDDGYLN VPATEDSMDI SWSHERRSFD ERNGNVGLRW 900 RSDEASDEEE QSPQRPEEVS SSEEGAMQNN SKNKCTSTSH QLMVDNAKNR LNYLQERFTD 960 LQSARKEGRA GDVAVLEEQV YQSLREWKAE LFTPSPASSL LGGSLGSFSD DINRLLQLRG 1020 EEDDDATSPL KGPAVLKPET DIQNLSPSNL HLIPEDYLVN HEPEEHGFQG FDPCKVSTSA 1080 LESTMVGNAD INYQLDYHPF DLQQEFDHGL LIGANGTEDC VRDANPNVLP NISPPPSAFM 1140 GPKCALWDCT RPAQGSDWWS QDYCSNFHAT LALNEDPPGM PPIVRPGGIS LKDNLLLDAL 1200 RAKSQGKNVG IPQCEGAATM KSPWNATDQQ VSRSADLFDL SLLEGEILRE WLFFDKPRRA 1260 FESGNRKQRS LPDYSGRGWH ESRKQVMKEF GGQKRSYYMD PQPSGQYEWH LFEYEIYGCD 1320 AFALYRLELK LGNEKKSPKV KVTKDSLADL QKKMGRLTAE VPGDDKSPEI PSPDRIFNAN 1380 SIRQVIGGGW NLETGDSKES FYVGPLADGL NQWPLEEDLP SWRSTVETYH KKVLSVGTKL 1440 LSLVALALRL DEDFFQKVGA LNEPLAFIRL LHYPETYGAS AHSDYGTTTF LVTDGVPGLQ 1500 VCRDKSKKPR VWEDVPSMKG LSL

Sequence ? help Back to Top

Protein Sequence Length: 1523 aa Download sequence

MEKAEINGPI LPSSPASNSR TVRSLASPPL QPNYSSRPVQ EALEHLASID LNELFNEAKV  60
EYCRAARDLR SCGRYVQYAL NSCGHASLCA ECSQRCDLCP ICRIPLPKSG NNRIRLRLYD  120
ECLDAGLISR RCDERKSTDV TDICMDETAV SSDAVTALLL DEKVVKDWVK RTFKNITAEL  180
QGIYYQEIKE MKDRLCSLLK FSVHLAGLSS VLEVLESSFK GRLVAQLHDL HQLQEGILKT  240
KQHLEIAMWC IRHQFLEHVK SRHANFTSWR NLVRERKAAA IDRAWPDVLD HLADSTGSVG  300
SLFIEDALAN LDIEQAYDQE VGDKSDFPFL QKNGALSFFK SKIEGMTGCY PFENLRAAVD  360
ILFLRSSSDL VVAKRAIFLY YLFDRHWSMP EEEWRPIVDD FAASFGISRH LLLESFTFCL  420
LDDHSDDALL ESRQLLPEIS GPATHPKIAQ VLLERQSPEA AQMVLRCSGR DVVFQLVSLS  480
EAVTIVRVKM ECALLTEAFT YQRMLCTKVR DKKFKYGPSG DAFDDMKGQC RSWMDWVEVL  540
VTEICCLCIR RNLVDRMIEL PWNSDEEKYI HKCLLDQATA HPSTTIGSLL VVFYLQRYRY  600
VEAYQVNLKL WSLEQEFISN NSVDEEVLSR MESQRQRRKE LVDKGIELLP EVLQQQVKTG  660
TFSDIVIASG QVDEMSASSG LSELQEPKSA LLVPSTSDSI LLRPDHMATP FRPPVFEIPK  720
GGYVDKSHVE AGDNGSSSIL QGKLFADAER ASNLEVVKNF KFDDISSPGI RRLTPTYSTP  780
VKGISWSSSR ELPNRHLQEK QSNIIILEGE QNGFVNQVRK ASPPYSRRVT ANPVSTPSSN  840
SGLFKGFANN LRSDVSGKRG QSDRDDGYLN VPATEDSMDI SWSHERRSFD ERNGNVGLRW  900
RSDEASDEEE QSPQRPEEVS SSEEGAMQNN SKNKCTSTSH QLMVDNAKNR LNYLQERFTD  960
LQSARKEGRA GDVAVLEEQV YQSLREWKAE LFTPSPASSL LGGSLGSFSD DINRLLQLRG  1020
EEDDDATSPL KGPAVLKPET DIQNLSPSNL HLIPEDYLVN HEPEEHGFQG FDPCKVSTSA  1080
LESTMVGNAD INYQLDYHPF DLQQEFDHGL LIGANGTEDC VRDANPNVLP NISPPPSAFM  1140
GPKCALWDCT RPAQGSDWWS QDYCSNFHAT LALNEDPPGM PPIVRPGGIS LKDNLLLDAL  1200
RAKSQGKNVG IPQCEGAATM KSPWNATDQQ VSRSADLFDL SLLEGEILRE WLFFDKPRRA  1260
FESGNRKQRS LPDYSGRGWH ESRKQVMKEF GGQKRSYYMD PQPSGQYEWH LFEYEIYGCD  1320
AFALYRLELK LGNEKKSPKV KVTKDSLADL QKKMGRLTAE VPGDDKSPEI PSPDRIFNAN  1380
SIRQVIGGGW NLETGDSKES FYVGPLADGL NQWPLEEDLP SWRSTVETYH KKVLSVGTKL  1440
LSLVALALRL DEDFFQKVGA LNEPLAFIRL LHYPETYGAS AHSDYGTTTF LVTDGVPGLQ  1500
VCRDKSKKPR VWEDVPSMKG LSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-155	VOZ family protein

Link Out ? help Back to Top
Ensembl	OMO59608