PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO60924
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family NAC
Protein Properties Length: 131aa    MW: 15089.4 Da    PI: 9.7336
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO60924genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.81.6e-132171157
       NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeeke 57
              +p GfrF+P+d++lvv+yLk+k+ +++l+  ++i+ev++y++ P+ L +     e+ 
  OMO60924 21 VPIGFRFKPRDDQLVVHYLKPKAYNQPLPP-NIIEEVELYSYSPEALTA-----ERA 71
              589************************999.89**************73.....222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MEEAPSSSRQ PLVRRKPKIN VPIGFRFKPR DDQLVVHYLK PKAYNQPLPP NIIEEVELYS  60
YSPEALTAER AWSHAMEKRQ LPDGPNARQR IYLIGRLRKA VKWADLFSHL CSIKGDSRTS  120
LEAEVCLQFG C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.16e-12NAC family protein