PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO61957

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 196aa MW: 21542.8 Da PI: 4.9333

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO61957	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.4	2e-15	45	97	4	56
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 lkr rr+ +NRe+ArrsR+RK++ ++ Le +++L +eN++L k+l + ++ OMO61957 45 LKRLRRMLSNRESARRSRKRKQEHLADLEFQAEQLRGENDSLYKQLTNAHQQF 97 8******************************************8888776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MNEVGGGTSG NSSDQDQEAI SDEELEDDVG TLVDAAHTLD DPTLLKRLRR MLSNRESARR 60 SRKRKQEHLA DLEFQAEQLR GENDSLYKQL TNAHQQFRDA DTNNRVLKSD VEALRAKVKL 120 AEDMVGRGSL TCSLNQLIQS QLGSGAAINN VNLRRVPNVS PTITVHADDS SPYTLTRNSI 180 GINAADAVSC VSDIWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	59	65	RRSRKRK
2	59	66	RRSRKRKQ
3	61	66	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	1e-58	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO61957