PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO63148
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family NAC
Protein Properties Length: 140aa    MW: 15625.4 Da    PI: 3.9489
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO63148genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM28.64.1e-0992139348
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykvePwdLp 48 
                G+ F Ptd+elv  yL+ k + +++e+ +v  i+e+ +y++ P +L 
  OMO63148  92 LGMYFYPTDQELVLSYLASKNNPSQVETPNVnlIPEAAVYQLTPDQLS 139
               69******************9999966544334************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MRCLQEVEPV LNSNGDGIGF KRTLEFFDGY PTNADSTKIG WCIQEYSTAQ DGRDDWLLCQ  60
ISTAEAEGMN NPVPEAELHS IPYLNKKPMD TLGMYFYPTD QELVLSYLAS KNNPSQVETP  120
NVNLIPEAAV YQLTPDQLSG