PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO63913

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 195aa MW: 22205.7 Da PI: 9.1313

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO63913	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.8	1.2e-13	126	176	4	54
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 + + +rk+kNReAArrs Kka++++Le +v+ L ++N L k ++ + OMO63913 126 DAAHIRKIKNREAARRSHDQKKAYMQQLESEVQGLRKQNANLWKFIQFSTS 176 56789***********************************99887766555 PP

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence
MGQTKNEKDN DKPFAQNIQG FDLNKLLEDP NAFEMAFFPP ESMNYNPNNH YVNQCIDFNE 60 LNQLLNEGNS GHDQVVTNGG CDGSIMQQPV QLQVNNAQVM EADPRVQENI KQSGRGRRKY 120 KQYCPDAAHI RKIKNREAAR RSHDQKKAYM QQLESEVQGL RKQNANLWKF IQFSTSASSS 180 GKDQKNLRRT ASGAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.1	2e-06	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO63913