PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO64351

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 354aa MW: 38180.6 Da PI: 9.1309

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO64351	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.8	8.7e-22	235	297	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL +kv++L aeN +L++e+++l+++++kl+ e+ OMO64351 235 ERELKRERRKQSNRESARRSRLRKQAETEELSRKVESLCAENATLRSEINQLTEKSEKLRLEN 297 89*********************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MGNNDEAKSS KSDKSSSPAP TDQTNIHVYP DWAAMQAYYG PRMTMPPYYN SPVPSGHAPP 60 AYMWGPPQPM MPPYGAPYAV YSHGGVYAHP AVPLATTPAE TPTKSSGNTE RGLMKKLKGF 120 DGLAMSIGNG TAENAEGGAE PRLSHSAETD GSTDGSDGNT TGTDQTRRKR SREGTPTIGG 180 DGKNEAKSKL VAAGEVTATG MTALELRNPA TMNAKSSPTN VPCGVMPPEV WMQNERELKR 240 ERRKQSNRES ARRSRLRKQA ETEELSRKVE SLCAENATLR SEINQLTEKS EKLRLENATL 300 VEGLKKAQLG QTKENTMNKK EAKEGEMYEK TPSSGAKLHQ LLDASPRTDA VAAG

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MGNNDEAKSS KSDKSSSPAP TDQTNIHVYP DWAAMQAYYG PRMTMPPYYN SPVPSGHAPP  60
AYMWGPPQPM MPPYGAPYAV YSHGGVYAHP AVPLATTPAE TPTKSSGNTE RGLMKKLKGF  120
DGLAMSIGNG TAENAEGGAE PRLSHSAETD GSTDGSDGNT TGTDQTRRKR SREGTPTIGG  180
DGKNEAKSKL VAAGEVTATG MTALELRNPA TMNAKSSPTN VPCGVMPPEV WMQNERELKR  240
ERRKQSNRES ARRSRLRKQA ETEELSRKVE SLCAENATLR SEINQLTEKS EKLRLENATL  300
VEGLKKAQLG QTKENTMNKK EAKEGEMYEK TPSSGAKLHQ LLDASPRTDA VAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	252	258	RRSRLRK
2	252	259	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	4e-96	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO64351