PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO64552
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family MYB_related
Protein Properties Length: 113aa    MW: 12887.4 Da    PI: 5.3166
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO64552genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.14.7e-091748132
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                     +g WT+eEd +l+++++ + +++Wk+Ia + g
         OMO64552 17 KGDWTAEEDRKLAEVIAVHSPKRWKSIAIKEG 48
                     799************************97755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MAEKMEENLS PRREINKGDW TAEEDRKLAE VIAVHSPKRW KSIAIKEGEQ SRVVIDKEWL  60
EGQEDDRWYY LLGKLLSQRA VNVEAVIRAE TPNGWSSRFE GTVQSGAKAG SSQ