PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO66179
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family C2H2
Protein Properties Length: 184aa    MW: 20938.1 Da    PI: 9.2787
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO66179genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013103125123
               EEETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
               ++C +Cgk F+    L  H+r+H
  OMO66179 103 HECAICGKKFNIGQALGGHMRKH 125
               78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MKRGRESEES VNFESSIDIT KCLMLLSQGM DNNKPKLGDL VDDEEVFECK TCHRRFPSFQ  60
ALGGHRASHI KKPRSMGDHE NRKANKDSKF DLSLGITSNP KVHECAICGK KFNIGQALGG  120
HMRKHRASIY ESFDPYYFPM VPKLPVLSRS NRKRILSLDL NLTPLENDLE ALFGNMAPKL  180
DLRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.17e-48C2H2 family protein