PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO66243
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family Dof
Protein Properties Length: 156aa    MW: 16609.7 Da    PI: 10.8837
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO66243genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1261.2e-3975134362
    zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
               e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+
  OMO66243  75 ETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 134
               7789*****************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MVFTSIPAYL DPANWQQHPN HQVGVTSGVN THQLPPPPPP PPPPQPHGGG GGGAGSIRPG  60
SMADRARMAN IPMPETALKC PRCESTNTKF CYFNNYSLTQ PRHFCKTCRR YWTRGGALRN  120
VPVGGGCRRN KRSKAGSSSK SPVSGDRQTA SGSSGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37590.17e-48Dof family protein