PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO67008
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family MYB_related
Protein Properties Length: 205aa    MW: 23074.5 Da    PI: 4.0281
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO67008genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding271e-0811342347
                     -HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                     +W++Ia +++ gRt++++k++w++ 
         OMO67008 11 RWSLIAGRLP-GRTDNEIKNYWNTT 34
                     5*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MLNFSLVLYC RWSLIAGRLP GRTDNEIKNY WNTTLGKKAK AQSSSPTSSE TPPSKSIHKT  60
PSAKAEETKI QVIRTKATRC SGNVLVPSQP PPVEDTEINL VEDYQPDLRN HDDQEMASTE  120
VFDEMPGSDF LNFEIDDQLA QLQTSNGESE ENNDDISKNL ALDPMQPLEF DEEMFKDWTT  180
NSCLDDNAAM NLDSLAFLLD PDQWP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35550.12e-12MYB family protein