PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO67151
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family ERF
Protein Properties Length: 151aa    MW: 16612.4 Da    PI: 9.3575
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO67151genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.2e-191968255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
              +ykGVr +k +g+WvAe+r p++   r r++lg++ taeeAa+a++aa  +l+g
  OMO67151 19 RYKGVRMRK-WGKWVAEVRQPNS---RGRIWLGSYKTAEEAARAYDAAVFCLRG 68
              69*****99.*******999843...48************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MVRPKRDRDD GVKNNGNGRY KGVRMRKWGK WVAEVRQPNS RGRIWLGSYK TAEEAARAYD  60
AAVFCLRGSS GKLNFPDNPP DIADASELTP AQIQEAAFRH ASSAITEEAE VKQEMAAAAA  120
VGKSYADCYF GTSGDGSNTR AYYHSPGVWT F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-30ERF family protein