PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO67966

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 193aa MW: 22325.9 Da PI: 7.5354

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO67966	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.9	1.2e-14	99	158	4	63
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr rr+ +NRe+ArrsR RKk+ i+eL+ v++L++ N++L ++l +l + + +e+ OMO67966 99 EKRLRRMKSNRESARRSRMRKKQLIQELQSQVDQLQTINHQLSQKLINLLESNHEILQEN 158 69*******************************************999988888777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MEEPDHFKLH HRNQAVQNFF ALCPSQKTYT SATHLNMQSW EMAGNRGLHG NSSQHPDSSS 60 TNFSHQVHFP FHLFSPNASP DLSTEDEGKE YHPASIADEK RLRRMKSNRE SARRSRMRKK 120 QLIQELQSQV DQLQTINHQL SQKLINLLES NHEILQENAQ LKDKVSTLHM VLADVFTPMR 180 NLEETSMEHK SSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	2e-37	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO67966