PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO68022

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

bZIP

Protein Properties

Length: 414aa MW: 44850.7 Da PI: 6.5715

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO68022	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.7	6.6e-10	216	274	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l++e+ OMO68022 216 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLALLQRDTNGLTAEN 274 9********************************************99998888777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MEKDKSPGLP PPSGRFSGFS SAGNAPNSFN VKPDSGGFGQ TSEPNRFSHD ISKMPDNPPK 60 NLGHRRAHSE ILTLPDDISF DSDLGVVGAA DGPSYSDETE EDLLSMYLDM DKFNSSSATS 120 AFQVGESSGP AGAAASPVPG MGVGAGAGMV AAENVSVAVG SSEKPRVRHQ HSQSMDGSTS 180 IKPEMLMSGS EEVSAADAKK AMSAAKLAEL ALIDPKRAKR IWANRQSAAR SKERKMRYIA 240 ELERKVQTLQ TEATSLSAQL ALLQRDTNGL TAENSELKLR LQTMEQQVHL QDALNDALKE 300 EIQHLKVLTG QAMPNANGGP MVNFASYGGS QQYYPNNHAM HLLTAQQFQQ LQIHSQKHQH 360 QHQFQQHQLH QLQQQQLQQE QQQQQIGETR VRGSMPSPSQ KDGSSDVSST ASRD

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MEKDKSPGLP PPSGRFSGFS SAGNAPNSFN VKPDSGGFGQ TSEPNRFSHD ISKMPDNPPK  60
NLGHRRAHSE ILTLPDDISF DSDLGVVGAA DGPSYSDETE EDLLSMYLDM DKFNSSSATS  120
AFQVGESSGP AGAAASPVPG MGVGAGAGMV AAENVSVAVG SSEKPRVRHQ HSQSMDGSTS  180
IKPEMLMSGS EEVSAADAKK AMSAAKLAEL ALIDPKRAKR IWANRQSAAR SKERKMRYIA  240
ELERKVQTLQ TEATSLSAQL ALLQRDTNGL TAENSELKLR LQTMEQQVHL QDALNDALKE  300
EIQHLKVLTG QAMPNANGGP MVNFASYGGS QQYYPNNHAM HLLTAQQFQQ LQIHSQKHQH  360
QHQFQQHQLH QLQQQQLQQE QQQQQIGETR VRGSMPSPSQ KDGSSDVSST ASRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-133	bZIP family protein

Link Out ? help Back to Top
Ensembl	OMO68022