PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO68673
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family C2H2
Protein Properties Length: 294aa    MW: 32939.8 Da    PI: 9.4968
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO68673genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.00072269288221
               EETTTTEEESSHHHHHHHHH CS
   zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
               +C+ C+  + +k++L+rH++
  OMO68673 269 RCKVCDVQCADKDSLQRHLM 288
               7*****************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MGDERTISVE LALQREMEYR RKINGKRLQL LPLDSGDEIL PIQVKFPSPN LNISPRPCGR  60
EKLPPPSNPG CLPNISSAPP PPSSALSRNP FSRPNISSGP RILERKQQLG SSSNIPPPQQ  120
PQALKNLNHP SNYFCEDCQV PCSGFLNYQQ HINSKMHKAK LQASKLGRKD GGGASDSMAN  180
EKPYCKLCNV WCSDLNLLRQ HLLGQKHKKM QAKLGEIAVE QNRCQLCGIE CSSKELLQAH  240
YDGKKHQAEL RKLEYAQKGS GEAQNRPKRC KVCDVQCADK DSLQRHLMER TFLT