PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OMO69010
Organism
Corchorus capsularis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus
Family C2H2
Protein Properties Length: 197aa    MW: 21473.3 Da    PI: 4.6782
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OMO69010genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000263555323
              ETTTTEEESSHHHHHHHHHHT CS
   zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
              C  Cg++F ++  L  Hi  H
  OMO69010 35 CRVCGQVFMNNAALFDHIEIH 55
              ******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MAGLGNGLNP ISHANIMHGL NLIKEEPFTD GPIACRVCGQ VFMNNAALFD HIEIHLVIDE  60
EDARRKVLLS HMTPSQRALF TTLVDQPTAA GNGGGDNDLQ SPSATAPPSS TSGESSSGNN  120
NNKCYMPRPI RTPYGVIQVV YVPQAPAPQQ PRENLVTRPL INLLDDHLFM DGMTRIFEMQ  180
MAAEDEVEPT VDLTLRL