PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OMO69048

Organism

Corchorus capsularis

Taxonomic ID

210143

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Grewioideae; Apeibeae; Corchorus

Family

G2-like

Protein Properties

Length: 260aa MW: 30035.8 Da PI: 6.0851

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OMO69048	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	1e-33	30	84	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFveav+qLGG++kAtPktil++m+vkgLtl+h+kSHLQk+Rl OMO69048 30 KPRLRWTVELHERFVEAVSQLGGPDKATPKTILKIMGVKGLTLYHLKSHLQKFRL 84 79****************************************************8 PP
2	Myb_DNA-binding	67.6	2.1e-21	32	83	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++v+av qlGg+ t+ktI + mg kg+tl+++ks++qk++ OMO69048 32 RLRWTVELHERFVEAVSQLGGPdkaTPKTILKIMGvKGLTLYHLKSHLQKFR 83 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MFHAKKPTFN TYDRVCEQGD SGLVLTTDPK PRLRWTVELH ERFVEAVSQL GGPDKATPKT 60 ILKIMGVKGL TLYHLKSHLQ KFRLGRHPQR DFHDQSVRNS RKVSELDFSR NDAIGIRACC 120 FNDHQIVQHT GEVSLEMELG SRLNEELEQV QKHLQMRIEA QGKYMQKILE KAEENTKYFG 180 IEKFGNIGTM DTIDFASHLN FPSLEELHYI PASEATTMEK QWKNTESPMV IWSNDFQPQD 240 IVNETPDFHS DGESFQDDNI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79430.2	9e-69	G2-like family protein

Link Out ? help Back to Top
Ensembl	OMO69048